tag: tbss

FSL/TBSS: Determine anatomical labels from clusters using Python

2020-08-12

After some time building more and more contrast maps with FSL/TBSS, I needed some way to compile information - anatomical in particular - from clusters in a thresholded map. The typical information that may then be reported in a paper. I was probably not the first one to look for this …


How to parallelize TBSS / randomise (sort of)

2018-02-26

Lots of resources - which I surely have not exhausted - are available on how to make optimal use of TBSS and in particular of the lengthy repetitive randomise part and the way to reduce costs in execution time. I confess I may have not tried hard after my first issues with …


Building design matrices for TBSS Randomise

2018-02-14

Creating design matrices by hand for TBSS can be done in different ways (explained here), either using the FSL Wizard Gui or exporting it from a text file or an Excel table.

A design matrix in TBSS is nothing but another text file using its own (Vest) format. This shows …